The Austin Chronicle

https://www.austinchronicle.com/columns/2002-01-11/84311/

About AIDS

New gene test shows if HIV drugs will work

By Sandy Bartlett, January 11, 2002, Columns

Because it reproduces very fast and makes careless mistakes, HIV naturally mutates and grows resistant to any given drug over time. Perhaps 20-60% of HIV positive people have a virus that resists at least one of the 15 drugs. So how can poz people tell if a drug is going to work as part of their treatment cocktail? There are two types of resistance testing: Phenotype testing challenges a virus sample with a given drug to see if it grows despite the treatment; and genotype tests examine the sample virus' actual genetic makeup, looking for specific mutations known to likely cause resistance to a drug. Both tests are slow (2-4 weeks), expensive ($250-900), sometimes not covered by insurance, and too technologically complex for all but a few labs.

Even so, resistance tests should always inform treatment decisions, given the $1000-plus monthly cost of HIV drugs and the suffering caused by ineffective treatment.

Recently, however, the FDA approved Visible Genetics' Trugene, the first test to identify resistance-causing mutations quickly. A blood sample is sent to one of 130 Trugene-trained affiliate labs, where the viral genome is computer-decoded. All mutations are identified and matched to more than 70 mutations currently known to cause resistance to specific AIDS drugs. A year of FDA review found Trugene to be 98% accurate, and newly discovered mutation data can be quickly added to the computer software to keep Trugene current.

Especially because Trugene takes only three days and is competitive at $300-$500, this remarkable genetic testing process can be an important tool in helping physicians choose the most effective treatment combination for each patient, saving lives and money at the same time.

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